StrainRanking
StrainRanking: Ranking of pathogen strains
Regression-based ranking of pathogen strains with respect to their contributions to natural epidemics, using demographic and genetic data sampled in the curse of the epidemics. Publication: Soubeyrand S., Tollenaere C., Haon-Lasportes E. & Laine A.-L. (2014). Regression-based ranking of pathogen strains with respect to their contributions to natural epidemics. PLOS ONE 9(1): e86591.doi:10.1371/journal.pone.0086591.
Note: The GMCPIC package is embedded in StrainRanking since the 1.2 version.
| Version: | 1.2 |
| Depends: | R (≥ 3.0.0), methods |
| Published: | 2017-11-29 |
| Author: | Soubeyrand, S., Tollenaere, C., Haon-Lasportes, E. and Laine, A.-L. |
| Maintainer: | Samuel Soubeyrand <samuel.soubeyrand at inra.fr> |
| License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2.0)] |
CRAN Link:
http://cran.r-project.org/web/packages/StrainRanking/